Hereditary cerebrovascular disease is dominated by a small set of well-characterized monogenic syndromes: CADASIL (the most common), CARASIL, COL4A1/A2-related small vessel disease, hereditary cavernous malformations, hereditary hemorrhagic telangiectasia (HHT), familial moyamoya, and Fabry disease (an important treatable cause of young stroke). This page covers the highest-yield first-line test for each — and importantly, when to escalate to a small-vessel disease panel or WES. Clinical syndrome detail is in the Stroke clinical chapter; here, the focus is on the lab side.

🔹 Bottom Line: Stroke & Cerebrovascular Genetics

  • CADASILNOTCH3 full-gene sequencing (focus on exons 2–24 with cysteine-altering variants). Most common hereditary small vessel disease.
  • CARASILHTRA1 biallelic variants (recessive). Heterozygous HTRA1 may also cause autosomal-dominant small vessel disease.
  • COL4A1 / COL4A2 → small vessel disease + porencephaly + leukoencephalopathy + retinal arteriolar tortuosity. Sequence both genes.
  • Familial cerebral cavernous malformationsKRIT1, CCM2, PDCD10.
  • HHTENG, ACVRL1, SMAD4, GDF2.
  • Familial moyamoyaRNF213 (especially East Asian background); moyamoya NGS panel.
  • Fabry disease → α-galactosidase A enzyme activity (males) + GLA sequencing (mandatory in females; enzyme can be normal).
  • Young cryptogenic stroke + family history → small vessel disease NGS panel covering all the above.

CADASIL (Cerebral Autosomal Dominant Arteriopathy with Subcortical Infarcts and Leukoencephalopathy)

  • First-line test: NOTCH3 full-gene sequencing.
  • Focus on exons 2–24 — virtually all CADASIL-causing variants are cysteine-altering missense (adding or removing a cysteine within the EGF-like repeat domains).
  • Yield: ~85–95% in classical CADASIL (recurrent subcortical infarcts + migraine + cognitive decline + leukoencephalopathy + family history).
  • If negative or VUS in classical phenotype: skin biopsy for granular osmiophilic material (GOM) on electron microscopy — diagnostic if positive.
  • Imaging clues that increase pre-test probability: anterior temporal pole white matter involvement (very specific), external capsule involvement, lacunar infarcts in basal ganglia and centrum semiovale.
  • Cascade family testing is straightforward once the variant is identified.

CARASIL (Cerebral Autosomal Recessive Arteriopathy with Subcortical Infarcts and Leukoencephalopathy)

  • First-line test: HTRA1 sequencing.
  • Inheritance: biallelic recessive variants cause classical CARASIL — early adult onset (20s–40s) of progressive cognitive decline + stroke + alopecia + spondylosis.
  • Heterozygous HTRA1 variants: now recognized to cause autosomal-dominant adult-onset small vessel disease with later onset than CARASIL — order HTRA1 in CADASIL-negative small vessel disease.
  • Geography: classically described in Japanese and Asian populations but now reported worldwide.

COL4A1 / COL4A2-Related Small Vessel Disease

  • First-line test: COL4A1 + COL4A2 sequencing.
  • Phenotype spectrum: porencephaly (in utero stroke), perinatal hemorrhage, sporadic adult ischemic stroke, leukoencephalopathy, retinal arteriolar tortuosity, intracranial aneurysms, Axenfeld-Rieger anomaly, HANAC syndrome (hereditary angiopathy with nephropathy, aneurysms, and cramps).
  • When to test: small vessel disease with retinal arteriolar tortuosity, porencephalic cysts, intracranial aneurysms, or multi-system involvement.

Familial Cerebral Cavernous Malformations (CCM)

  • First-line test: CCM NGS panel — KRIT1 (CCM1, most common), CCM2, PDCD10 (CCM3) — sequencing + del/dup.
  • When to test: multiple cavernous malformations on MRI; family history of CCM; CCM in a young patient.
  • Hispanic founder mutation: KRIT1 Q455X common in Hispanic populations of New Mexico ancestry — consider targeted testing.

Hereditary Hemorrhagic Telangiectasia (HHT / Osler-Weber-Rendu)

  • First-line test: HHT NGS panel — ENG, ACVRL1, SMAD4, GDF2 — sequencing + del/dup.
  • When to test: classical HHT triad (epistaxis + telangiectasias + family history); cerebral or pulmonary AVMs; high-output heart failure from AVMs.
  • Neurologic relevance: cerebral AVMs (10–20% of HHT patients), paradoxical embolism via pulmonary AVMs (cause of cryptogenic stroke).
  • SMAD4: HHT + juvenile polyposis overlap syndrome; surveillance for both.

Familial Moyamoya

  • First-line test: RNF213 sequencing — especially East Asian background.
  • RNF213 R4810K: common founder variant in Japanese / Korean / Chinese populations — disease-modifying with variable penetrance.
  • If negative: moyamoya NGS panel covering additional genes (ACTA2, BRCC3, others).
  • Pediatric / syndromic moyamoya: consider chromosomal microarray (Down syndrome, NF1) + WES.

Fabry Disease (Vascular Phenotype)

  • Critical principle: Fabry is an important treatable cause of young stroke — do not miss it.
  • First-line in males: α-galactosidase A enzyme activity (dried blood spot or whole blood).
  • First-line in females: GLA sequencing — enzyme activity can be normal in heterozygous females.
  • Reflex confirmation: plasma lyso-Gb3 biomarker (elevated in disease).
  • When to test stroke patients:
    • Young cryptogenic stroke (especially <55 years).
    • Family history of stroke / renal failure / cardiomyopathy.
    • Classic Fabry features: angiokeratomas, hypohidrosis, neuropathic pain, corneal verticillata.
    • Renal failure + neurologic symptoms.
    • Left ventricular hypertrophy in young patient.
  • Treatment relevance: confirmed Fabry → eligibility for enzyme replacement (agalsidase α / β) or chaperone therapy (migalastat, for amenable GLA mutations only).

Familial Intracranial Aneurysm

  • First-line test: intracranial aneurysm NGS panel covering ANIB genes, connective tissue disorders (COL3A1, FBN1), and known aneurysm-associated genes.
  • When to test: ≥2 first-degree relatives with intracranial aneurysm; aneurysm in a young patient with connective tissue features; multiple aneurysms.
  • Differential genes: COL3A1 (vascular Ehlers-Danlos), FBN1 (Marfan), LOX, FOXE3, THSD1, RNF213 (overlap with moyamoya).

Cerebral Amyloid Angiopathy (Hereditary)

  • Sporadic CAA: clinical / imaging diagnosis (Boston criteria); no genetic test routinely needed.
  • Hereditary CAA forms: rare — Dutch / Iowa / Flemish CAA (mutations in APP), British / Danish familial dementia (ITM2B), Icelandic CAA (CST3 / cystatin C), Finnish hereditary amyloidosis (GSN / gelsolin).
  • When to test: very early-onset CAA + strong family history + unusual ethnic background → targeted gene by ancestry.

Hereditary Stroke / Young Stroke Workup Strategy

For an unexplained young stroke (<55 years) with no obvious cause after standard workup, consider genetic testing in the following order:

  1. Fabry disease first: α-Gal A enzyme (males) + GLA sequencing (females). It is treatable and shouldn’t be missed.
  2. Family history of stroke + subcortical white matter diseaseNOTCH3 sequencing (CADASIL).
  3. Suggestive imaging (e.g., porencephaly, retinal arteriolar tortuosity) → COL4A1 / COL4A2.
  4. Multiple cavernous malformations → CCM panel.
  5. AVMs + epistaxis + family history → HHT panel.
  6. Moyamoya on imagingRNF213.
  7. Multiple aneurysms + young patient + family history → aneurysm / connective tissue NGS panel.
  8. Compatible CADASIL-like phenotype but NOTCH3 negativeHTRA1, COL4A1/A2, or small vessel disease NGS panel.

Disease → Test Quick Reference Table

Disease First-line test Reflex / alternative
CADASIL NOTCH3 full-gene sequencing (exons 2–24, cysteine-altering) Skin biopsy for GOM if negative or VUS
CARASIL HTRA1 biallelic variants Heterozygous HTRA1 for autosomal-dominant SVD
COL4A1/A2-related disease COL4A1 + COL4A2 sequencing Small vessel disease NGS panel
Familial CCM CCM panel (KRIT1, CCM2, PDCD10) sequencing + del/dup
HHT HHT panel (ENG, ACVRL1, SMAD4, GDF2)
Familial moyamoya RNF213 (East Asian) Moyamoya NGS panel; chromosomal microarray (pediatric/syndromic)
Fabry disease (stroke) α-Gal A enzyme (males) + GLA sequencing (mandatory in females) Plasma lyso-Gb3 biomarker
Familial intracranial aneurysm Intracranial aneurysm NGS panel COL3A1 if Ehlers-Danlos features; FBN1 for Marfan
Hereditary CAA (rare) Targeted gene by ethnic background (APP, ITM2B, CST3, GSN)
Young cryptogenic stroke (general) Small vessel disease NGS panel + Fabry workup WES if panel negative

🔹 Clinical Relevance: Don’t Miss Fabry Disease in Young Stroke

Fabry disease is a treatable X-linked lysosomal storage disorder that causes 1–4% of young cryptogenic strokes. Hallmark features beyond stroke: angiokeratomas, hypohidrosis, neuropathic pain in childhood, corneal verticillata on slit lamp, renal failure, left ventricular hypertrophy. Order α-Gal A enzyme activity in males and GLA sequencing in females (enzyme can be normal in females). Confirming Fabry unlocks enzyme replacement (agalsidase) or chaperone therapy (migalastat for amenable mutations), and triggers cascade family screening — siblings, mother, and offspring of an affected male all need testing.

Pitfalls and Pearls

  • CADASIL → NOTCH3: focus on cysteine-altering variants in exons 2–24. Yield 85–95% in classical phenotype.
  • NOTCH3 VUS with classical CADASIL phenotype → skin biopsy for GOM is diagnostic.
  • CADASIL imaging clue: anterior temporal pole + external capsule white matter — very specific.
  • HTRA1: classical CARASIL is biallelic recessive; heterozygous HTRA1 now recognized as autosomal-dominant adult-onset SVD.
  • COL4A1/A2: think about it with porencephaly, retinal arteriolar tortuosity, or aneurysms.
  • Fabry in young stroke: do NOT miss. α-Gal A in males; GLA sequencing mandatory in females (enzyme can be normal).
  • HHT + cerebral AVMs: paradoxical embolism via pulmonary AVMs is a cause of cryptogenic stroke.
  • Moyamoya + East Asian: targeted RNF213 R4810K.
  • Family history of intracranial aneurysm: counsel about Ehlers-Danlos vascular type (COL3A1) — surgical / endovascular implications.
  • Cascade family testing: facilitate after any positive diagnosis.
  • Treatment-driven testing: Fabry → enzyme replacement / chaperone; hATTR also relevant (covered on peripheral neuropathy page).

References

  1. Joutel A, Corpechot C, Ducros A, et al. Notch3 mutations in CADASIL, a hereditary adult-onset condition causing stroke and dementia. Nature. 1996;383(6602):707-710.
  2. Hara K, Shiga A, Fukutake T, et al. Association of HTRA1 mutations and familial ischemic cerebral small-vessel disease. N Engl J Med. 2009;360(17):1729-1739.
  3. Verdura E, Hervé D, Scharrer E, et al. Heterozygous HTRA1 mutations are associated with autosomal dominant cerebral small vessel disease. Brain. 2015;138(Pt 8):2347-2358.
  4. Lanfranconi S, Markus HS. COL4A1 and COL4A2 mutations and disease. Stroke. 2010;41(8):e513-e518.
  5. Sciacca FL, Ciusani E, Silvani A, Corsini E. Genetics of cerebral cavernous malformations. J Neurosurg Sci. 2014;58(3):137-146.
  6. Kamimura T, Okazaki S, Morimoto T, et al. Prevalence of RNF213 p.R4810K variant in early-onset stroke with intracranial arterial stenosis. Stroke. 2019;50(6):1561-1563.
  7. Mehta A, Beck M, Eyskens F, et al. Fabry disease: a review of current management strategies. QJM. 2010;103(9):641-659.
  8. Faughnan ME, Mager JJ, Hetts SW, et al. Second international guidelines for the diagnosis and management of hereditary hemorrhagic telangiectasia. Ann Intern Med. 2020;173(12):989-1001.